org.apache.uima.jcas.impl

## Class JCasImpl

- java.lang.Object
- - org.apache.uima.cas.AbstractCas_ImplBase
  - - org.apache.uima.jcas.impl.JCasImpl

- All Implemented Interfaces:
    AbstractCas, JCas

      public class JCasImpl
      extends AbstractCas_ImplBase
      implements AbstractCas, JCas

  implements the supporting infrastructure for JCas model linked with a Cas. There is one logical instance of this instantiated per CasView. If you hold a reference to a CAS, to get a reference to the corresponding JCas, use the method getJCas(). Likewise, if you hold a reference to this object, you can get a reference to the corresponding CAS object using the method getCas().

- - ### Field Summary

    - ### Fields inherited from interface org.apache.uima.jcas.JCas

      `INVALID_FEATURE_CODE`

  - ### Method Summary

    All Methods Static Methods Instance Methods Concrete Methods Deprecated Methods
    Modifier and Type | Method and Description
    --- | ---
    `void` | `addFsToIndexes(FeatureStructure instance)` Add a feature structure to all appropriate indexes in the repository associated with this CAS View.
    `static void` | `clearData(CAS cas)`
    `FeaturePath` | `createFeaturePath()` Create a feature path.
    `FeatureValuePath` | `createFeatureValuePath(String featureValuePath)` Create a feature-value path from a string.
    `<T extends FeatureStructure> FSIterator<T>` | `createFilteredIterator(FSIterator<T> it, FSMatchConstraint constraint)` Create an iterator over structures satisfying a given constraint.
    `TOP` | `createFS(Type type)`
    `SofaFS` | `createSofa(SofaID sofaID, String mimeType)` Create a Subject of Analysis.
    `JCas` | `createView(String sofaID)` Create a view and its underlying Sofa (subject of analysis).
    `<T extends FeatureStructure> ListIterator<T>` | `fs2listIterator(FSIterator<T> it)` Wrap a standard Java `ListIterator` around an FSListIterator.
    `<T extends TOP> FSIterator<T>` | `getAllIndexedFS(Class<T> clazz)` Gets an iterator over all indexed FeatureStructures of the specified Type (and any of its subtypes).
    `AnnotationIndex<Annotation>` | `getAnnotationIndex()` Get the standard annotation index.
    `<T extends Annotation> AnnotationIndex<T>` | `getAnnotationIndex(Class<T> clazz)` Get the standard annotation index restricted to a specific annotation type.
    `<T extends Annotation> AnnotationIndex<T>` | `getAnnotationIndex(int type)` Get the standard annotation index restricted to a specific annotation type.
    `<T extends Annotation> AnnotationIndex<T>` | `getAnnotationIndex(Type type)` Get the standard annotation index restricted to a specific annotation type.
    `CAS` | `getCas()`
    `CASImpl` | `getCasImpl()`
    `Type` | `getCasType(Class<? extends FeatureStructure> clazz)` Return the UIMA Type object corresponding to this JCas's JCas cover class (Note: different JCas's, with different type systems, may share the same cover class impl)
    `Type` | `getCasType(int i)` Given Foo.type, return the corresponding CAS Type object.
    `ConstraintFactory` | `getConstraintFactory()` Get a constraint factory.
    `TOP` | `getDocumentAnnotationFs()` Gets the document annotation.
    `String` | `getDocumentLanguage()` Gets the language code for this document from the language feature of the special instance of the DocumentationAnnotation associated with this CAS.
    `String` | `getDocumentText()` Get the document text.
    `FloatArray` | `getFloatArray0L()` Deprecated.
    `FSArray` | `getFSArray0L()` Deprecated.
    `FSIndexRepository` | `getFSIndexRepository()`
    `<T extends TOP> FSIndex<T>` | `getIndex(String label, Class<T> clazz)` Retrieve an index according to a label and a type specified using a JCas class.
    `FSIndexRepository` | `getIndexRepository()` Get the index repository.
    `IntegerArray` | `getIntegerArray0L()` Deprecated.
    `static JCasImpl` | `getJCas(CASImpl cas)` creates a new JCas instance that corresponds to a CAS instance.
    `JCas` | `getJCas(Sofa sofa)` Create a JCas view for a Sofa.
    `JFSIndexRepository` | `getJFSIndexRepository()` Gets the JCas-based interface to the Index Repository.
    `LowLevelCAS` | `getLowLevelCas()`
    `LowLevelIndexRepository` | `getLowLevelIndexRepository()`
    `Feature` | `getRequiredFeature(Type t, String s)`
    `Type` | `getRequiredType(String s)`
    `Sofa` | `getSofa()` Get the Sofa feature structure associated with this JCas view.
    `Sofa` | `getSofa(SofaID sofaID)`
    `FeatureStructure` | `getSofaDataArray()` Get the Sofa data array.
    `InputStream` | `getSofaDataStream()` Get the Sofa data as a byte stream.
    `String` | `getSofaDataString()` Get the Sofa Data String (a.k.a.
    `String` | `getSofaDataURI()` Get the Sofa data array.
    `FSIterator<SofaFS>` | `getSofaIterator()` Get iterator for all SofaFS in the CAS.
    `String` | `getSofaMimeType()` Get the mime type of the Sofa data being analyzed.
    `StringArray` | `getStringArray0L()` Deprecated.
    `TOP_Type` | `getType(int i)` Backwards Compatibility only - throws unsupported operation exception In UIMA V2, this previously got the JCas _Type instance for a particular CAS type constant In UIMA V3, there is no _Type instance, so this throws an exception
    `TOP_Type` | `getType(TOP instance)` get the JCas x_Type instance for a particular Java instance of a type
    `TypeSystem` | `getTypeSystem()` Return the type system of this CAS instance.
    `JCas` | `getView(SofaFS aSofa)` Get the view for a Sofa (subject of analysis).
    `JCas` | `getView(String localViewName)` Get the view for a Sofa (subject of analysis).
    `Iterator<JCas>` | `getViewIterator()` Get iterator over all views in this JCas.
    `Iterator<JCas>` | `getViewIterator(String localViewNamePrefix)` Get iterator over all views with the given name prefix.
    `String` | `getViewName()` Get the view name.
    `void` | `processInit()` initialize the JCas for new Cas content.
    `AutoCloseable` | `protectIndexes()` Call this method to set up a region, ended by a close() call on the returned object, You can use this or the `JCas.protectIndexes(Runnable)` method to protected the indexes.
    `void` | `protectIndexes(Runnable runnable)` Runs the code in the runnable inside a protection block, where any modifications to features done while in this block will be done in a way to protect any indexes which otherwise might become corrupted by the update action; the protection is achieved by temporarily removing the FS (if it is in the indexes), before the update happens.
    `void` | `release()` Default implementation that returns this CAS to its CasManager by calling `CasOwner.releaseCas(AbstractCas)`.
    `void` | `removeAllExcludingSubtypes(int i)` Remove all feature structures of a given type (excluding subtypes) from all indexes in the repository associated with this CAS View.
    `void` | `removeAllIncludingSubtypes(int i)` Remove all feature structures of a given type (including subtypes) from all indexes in the repository associated with this CAS View.
    `void` | `removeFsFromIndexes(FeatureStructure instance)` Remove a feature structure from all indexes in the repository associated with this CAS View.
    `void` | `reset()` Reset the CAS, emptying it of all content.
    `void` | `setDocumentLanguage(String language)` Sets the language for this document.
    `void` | `setDocumentText(String text)` Set the document text.
    `void` | `setOwner(CasOwner aCasOwner)` Provides this CAS with a handle to the CASOwner that owns it.
    `void` | `setSofaDataArray(FeatureStructure array, String mime)` Set the Sofa data as an ArrayFS.
    `void` | `setSofaDataString(String text, String mime)` Set the document text.
    `void` | `setSofaDataURI(String uri, String mime)` Set the Sofa data as a URI.
    `int` | `size()` Estimate the memory consumption of this CAS instance (in bytes).

    - ### Methods inherited from class java.lang.Object

      `clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

    - ### Methods inherited from interface org.apache.uima.jcas.JCas

      `checkArrayBounds, emptyArray, emptyBooleanArray, emptyByteArray, emptyDoubleArray, emptyFloatArray, emptyFloatList, emptyFSArray, emptyFSArray, emptyFSList, emptyIntegerArray, emptyIntegerList, emptyList, emptyLongArray, emptyShortArray, emptyStringArray, emptyStringList, getAllIndexedFS, getIndexedFSs, getIndexedFSs, getIndexedFSs, getJfsFromCaddr, getRequiredFeatureDE, putJfsFromCaddr, removeAllExcludingSubtypes, removeAllIncludingSubtypes, select, select, select, select, select, throwFeatMissing`

- - ### Method Detail

    - #### getFSIndexRepository

          public FSIndexRepository getFSIndexRepository()

      Specified by:
        `getFSIndexRepository` in interface `JCas`
      Returns:
        the FSIndexRepository object for this Cas

    - #### getLowLevelIndexRepository

          public LowLevelIndexRepository getLowLevelIndexRepository()

      Specified by:
        `getLowLevelIndexRepository` in interface `JCas`

    - #### getCas

          public CAS getCas()

      Specified by:
        `getCas` in interface `JCas`
      Returns:
        the CAS object for this JCas instantiation

    - #### getCasImpl

          public CASImpl getCasImpl()

      Specified by:
        `getCasImpl` in interface `JCas`

    - #### getLowLevelCas

          public LowLevelCAS getLowLevelCas()

      Specified by:
        `getLowLevelCas` in interface `JCas`

    - #### getTypeSystem

          public TypeSystem getTypeSystem()

      Description copied from interface: `JCas`
      Return the type system of this CAS instance.
      Specified by:
        `getTypeSystem` in interface `JCas`
      Returns:
        The type system, or `null` if none is available.

    - #### getType

          public TOP_Type getType(int i)

      Description copied from interface: `JCas`
      Backwards Compatibility only - throws unsupported operation exception In UIMA V2, this previously got the JCas _Type instance for a particular CAS type constant In UIMA V3, there is no _Type instance, so this throws an exception
      Specified by:
        `getType` in interface `JCas`
      Parameters:
        `i` - the CAS type constant, written as Foo.type
      Returns:
        none - throws an exception

    - #### getType

          public TOP_Type getType(TOP instance)

      Description copied from interface: `JCas`
      get the JCas x_Type instance for a particular Java instance of a type
      Specified by:
        `getType` in interface `JCas`
      Parameters:
        `instance` - instance
      Returns:
        the associated xxx_Type instance

    - #### getCasType

          public Type getCasType(int i)

      Description copied from interface: `JCas`
      Given Foo.type, return the corresponding CAS Type object. This is useful in the methods which require a CAS Type, for instance iterator creation.
      Specified by:
        `getCasType` in interface `JCas`
      Parameters:
        `i` - - index returned by Foo.type
      Returns:
        the CAS Java Type object for this CAS Type.

    - #### createFS

          public TOP createFS(Type type)

    - #### getJCas

          public static JCasImpl getJCas(CASImpl cas)

      creates a new JCas instance that corresponds to a CAS instance. Will be called once by the UIMA framework when it creates the CAS.
      Parameters:
        `cas` - a CAS instance
      Returns:
        newly created and initialized JCas // * @throws CASException -

    - #### getRequiredType

          public Type getRequiredType(String s)
                               throws CASException

      Specified by:
        `getRequiredType` in interface `JCas`
      Throws:
        `CASException`

    - #### getRequiredFeature

          public Feature getRequiredFeature(Type t,
                                            String s)
                                     throws CASException

      Specified by:
        `getRequiredFeature` in interface `JCas`
      Throws:
        `CASException`

    - #### clearData

          public static void clearData(CAS cas)

    - #### reset

          public void reset()

      Description copied from interface: `JCas`
      Reset the CAS, emptying it of all content. Feature structures and iterators will no longer be valid. Note: this method may only be called from an application. Calling it from an annotator will trigger a runtime exception.
      Specified by:
        `reset` in interface `JCas`
      See Also:
        `CASMgr`

    - #### getSofa

          public Sofa getSofa(SofaID sofaID)

      Specified by:
        `getSofa` in interface `JCas`
      Parameters:
        `sofaID` - -
      Returns:
        the Sofa

    - #### getSofa

          public Sofa getSofa()

      Description copied from interface: `JCas`
      Get the Sofa feature structure associated with this JCas view.
      Specified by:
        `getSofa` in interface `JCas`
      Returns:
        The SofaFS associated with this JCas view.

    - #### createView

          public JCas createView(String sofaID)
                          throws CASException

      Description copied from interface: `JCas`
      Create a view and its underlying Sofa (subject of analysis). The view provides access to the Sofa data and the index repository that contains metadata (annotations and other feature structures) pertaining to that Sofa.

      This method creates the underlying Sofa feature structure, but does not set the Sofa data. Setting ths Sofa data must be done by calling `JCas.setSofaDataArray(FeatureStructure, String)`, `JCas.setSofaDataString(String, String)` or `JCas.setSofaDataURI(String, String)` on the JCas view returned by this method.

      Specified by:
        `createView` in interface `JCas`
      Parameters:
        `sofaID` - the local view name, before any sofa name mapping is done, for this view (note: this is the same as the associated Sofa name).
      Returns:
        The view corresponding to this local name.
      Throws:
        `CASException` - - if a View with this name already exists in this CAS

    - #### getJCas

          public JCas getJCas(Sofa sofa)
                       throws CASException

      Description copied from interface: `JCas`
      Create a JCas view for a Sofa.
      Specified by:
        `getJCas` in interface `JCas`
      Parameters:
        `sofa` - a Sofa feature structure in this CAS.
      Returns:
        The JCas view for the given Sofa.
      Throws:
        `CASException` - -

    - #### getSofaIterator

          public FSIterator<SofaFS> getSofaIterator()

      Description copied from interface: `JCas`
      Get iterator for all SofaFS in the CAS.
      Specified by:
        `getSofaIterator` in interface `JCas`
      Returns:
        an iterator over SofaFS.

    - #### getJFSIndexRepository

          public JFSIndexRepository getJFSIndexRepository()

      Description copied from interface: `JCas`
      Gets the JCas-based interface to the Index Repository. Provides the same functionality as `JCas.getFSIndexRepository()` except that the methods that take a "type" argument take type arguments obtainable easily from the JCas type.
      Specified by:
        `getJFSIndexRepository` in interface `JCas`
      Returns:
        the JCas-based interface to the index repository

    - #### getDocumentAnnotationFs

          public TOP getDocumentAnnotationFs()

      Description copied from interface: `JCas`
      Gets the document annotation. The object returned from this method can be typecast to org.apache.uima.jcas.tcas.DocumentAnnotation if that class is loaded (it may not be...)

      The reason that the return type of this method is not DocumentAnnotation is because that class may not be loaded, or it may be loaded under a different class loader when using the UIMA Extension ClassLoader to load annotator classes.

      Specified by:
        `getDocumentAnnotationFs` in interface `JCas`
      Returns:
        The one instance of the DocumentAnnotation annotation.
      See Also:
        `CAS.getDocumentAnnotation()`

    - #### getDocumentText

          public String getDocumentText()

      Description copied from interface: `JCas`
      Get the document text.
      Specified by:
        `getDocumentText` in interface `JCas`
      Returns:
        The text being analyzed.

    - #### getSofaDataString

          public String getSofaDataString()

      Description copied from interface: `JCas`
      Get the Sofa Data String (a.k.a. the document text).
      Specified by:
        `getSofaDataString` in interface `JCas`
      Returns:
        The Sofa data string.

    - #### getSofaDataArray

          public FeatureStructure getSofaDataArray()

      Description copied from interface: `JCas`
      Get the Sofa data array.
      Specified by:
        `getSofaDataArray` in interface `JCas`
      Returns:
        The Sofa Data being analyzed.

    - #### getSofaDataURI

          public String getSofaDataURI()

      Description copied from interface: `JCas`
      Get the Sofa data array.
      Specified by:
        `getSofaDataURI` in interface `JCas`
      Returns:
        The Sofa Data being analyzed.

    - #### getSofaMimeType

          public String getSofaMimeType()

      Description copied from interface: `JCas`
      Get the mime type of the Sofa data being analyzed.
      Specified by:
        `getSofaMimeType` in interface `JCas`
      Returns:
        the mime type of the Sofa

    - #### setDocumentText

          public void setDocumentText(String text)
                               throws CASRuntimeException

      Description copied from interface: `JCas`
      Set the document text. Once set, Sofa data is immutable, and cannot be set again until the CAS has been reset.
      Specified by:
        `setDocumentText` in interface `JCas`
      Parameters:
        `text` - The text to be analyzed.
      Throws:
        `CASRuntimeException` - If the Sofa data has already been set.

    - #### setSofaDataString

          public void setSofaDataString(String text,
                                        String mime)
                                 throws CASRuntimeException

      Description copied from interface: `JCas`
      Set the document text. Once set, Sofa data is immutable, and cannot be set again until the CAS has been reset.
      Specified by:
        `setSofaDataString` in interface `JCas`
      Parameters:
        `text` - The text to be analyzed.
        `mime` - The mime type of the data
      Throws:
        `CASRuntimeException` - If the Sofa data has already been set.

    - #### setSofaDataArray

          public void setSofaDataArray(FeatureStructure array,
                                       String mime)
                                throws CASRuntimeException

      Description copied from interface: `JCas`
      Set the Sofa data as an ArrayFS. Once set, Sofa data is immutable, and cannot be set again until the CAS has been reset.
      Specified by:
        `setSofaDataArray` in interface `JCas`
      Parameters:
        `array` - The ArrayFS to be analyzed.
        `mime` - The mime type of the data
      Throws:
        `CASRuntimeException` - If the Sofa data has already been set.

    - #### setSofaDataURI

          public void setSofaDataURI(String uri,
                                     String mime)
                              throws CASRuntimeException

      Description copied from interface: `JCas`
      Set the Sofa data as a URI. Once set, Sofa data is immutable, and cannot be set again until the CAS has been reset.
      Specified by:
        `setSofaDataURI` in interface `JCas`
      Parameters:
        `uri` - The URI of the data to be analyzed.
        `mime` - The mime type of the data
      Throws:
        `CASRuntimeException` - If the Sofa data has already been set.

    - #### getDocumentLanguage

          public String getDocumentLanguage()

      Description copied from interface: `JCas`
      Gets the language code for this document from the language feature of the special instance of the DocumentationAnnotation associated with this CAS.
      Specified by:
        `getDocumentLanguage` in interface `JCas`
      Returns:
        language identifier

    - #### setDocumentLanguage

          public void setDocumentLanguage(String language)
                                   throws CASRuntimeException

      Description copied from interface: `JCas`
      Sets the language for this document. This value sets the language feature of the special instance of DocumentAnnotation associated with this CAS.
      Specified by:
        `setDocumentLanguage` in interface `JCas`
      Parameters:
        `language` - the language code
      Throws:
        `CASRuntimeException` - passthru

    - #### getSofaDataStream

          public InputStream getSofaDataStream()

      Description copied from interface: `JCas`
      Get the Sofa data as a byte stream.
      Specified by:
        `getSofaDataStream` in interface `JCas`
      Returns:
        A stream handle to the Sofa Data.

    - #### getConstraintFactory

          public ConstraintFactory getConstraintFactory()

      Description copied from interface: `JCas`
      Get a constraint factory. A constraint factory is a simple way of creating `FSMatchConstraints`.
      Specified by:
        `getConstraintFactory` in interface `JCas`
      Returns:
        A constraint factory to create new FS constraints.

    - #### createFeaturePath

          public FeaturePath createFeaturePath()

      Description copied from interface: `JCas`
      Create a feature path. This is mainly useful for creating `FSMatchConstraints`.
      Specified by:
        `createFeaturePath` in interface `JCas`
      Returns:
        A new, empty feature path.

    - #### createFilteredIterator

          public <T extends FeatureStructure> FSIterator<T> createFilteredIterator(FSIterator<T> it,
                                                                                   FSMatchConstraint constraint)

      Description copied from interface: `JCas`
      Create an iterator over structures satisfying a given constraint. Constraints are described in the javadocs for `ConstraintFactory` and related classes.
      Specified by:
        `createFilteredIterator` in interface `JCas`
      Type Parameters:
        `T` - the particular FeatureStructure type
      Parameters:
        `it` - The input iterator.
        `constraint` - The constraint specifying what structures should be returned.
      Returns:
        An iterator over FSs.

    - #### getStringArray0L

          @Deprecated
          public StringArray getStringArray0L()

      Deprecated.
      Description copied from interface: `JCas`
      A constant for each cas which holds a 0-length instance. Since this can be a common value, we avoid creating multiple copies of it. All uses can use the same valuee because it is not updatable (it has no subfields). This is initialized lazily on first reference, and reset when the CAS is reset.
      Specified by:
        `getStringArray0L` in interface `JCas`
      Returns:
        0-length instance of a StringArray

    - #### getIntegerArray0L

          @Deprecated
          public IntegerArray getIntegerArray0L()

      Deprecated.
      Description copied from interface: `JCas`
      Retrieve a lazily-created constant from the cas which holds a 0-length instance. Since this can be a common value, we avoid creating multiple copies of it. All uses can use the same value because it is not updatable (it has no subfields). This is initialized lazily on first reference, and reset when the CAS is reset.
      Specified by:
        `getIntegerArray0L` in interface `JCas`
      Returns:
        0-length instance of an IntegerArray

    - #### getFloatArray0L

          @Deprecated
          public FloatArray getFloatArray0L()

      Deprecated.
      Description copied from interface: `JCas`
      Retrieve a lazily-created constant from the cas which holds a 0-length instance. Since this can be a common value, we avoid creating multiple copies of it. All uses can use the same value because it is not updatable (it has no subfields). This is initialized lazily on first reference, and reset when the CAS is reset.
      Specified by:
        `getFloatArray0L` in interface `JCas`
      Returns:
        0-length instance of a FloatArray

    - #### getFSArray0L

          @Deprecated
          public FSArray getFSArray0L()

      Deprecated.
      Description copied from interface: `JCas`
      Retrieve a lazily-created constant from the cas which holds a 0-length instance. Since this can be a common value, we avoid creating multiple copies of it. All uses can use the same value because it is not updatable (it has no subfields). This is initialized lazily on first reference, and reset when the CAS is reset. See also the CAS API
      Specified by:
        `getFSArray0L` in interface `JCas`
      Returns:
        0-length instance of a FSArray

    - #### processInit

          public void processInit()

      Description copied from interface: `JCas`
      initialize the JCas for new Cas content. Not used, does nothing.
      Specified by:
        `processInit` in interface `JCas`

    - #### setOwner

          public void setOwner(CasOwner aCasOwner)

      Description copied from class: `AbstractCas_ImplBase`
      Provides this CAS with a handle to the CASOwner that owns it. This is called by the framework when a CAS instance is created. This handle is used to implement the release() method by returning the CAS to its CasOwner.
      Overrides:
        `setOwner` in class `AbstractCas_ImplBase`
      Parameters:
        `aCasOwner` - -

    - #### release

          public void release()

      Description copied from class: `AbstractCas_ImplBase`
      Default implementation that returns this CAS to its CasManager by calling `CasOwner.releaseCas(AbstractCas)`.
      Specified by:
        `release` in interface `AbstractCas`
      Overrides:
        `release` in class `AbstractCas_ImplBase`

    - #### getView

          public JCas getView(String localViewName)
                       throws CASException

      Description copied from interface: `JCas`
      Get the view for a Sofa (subject of analysis). The view provides access to the Sofa data and the index repository that contains metadata (annotations and other feature structures) pertaining to that Sofa.
      Specified by:
        `getView` in interface `JCas`
      Parameters:
        `localViewName` - the local name, before any sofa name mapping is done, for this view (note: this is the same as the associated Sofa name).
      Returns:
        The view corresponding to this local name.
      Throws:
        `CASException` - passthru

    - #### getView

          public JCas getView(SofaFS aSofa)
                       throws CASException

      Description copied from interface: `JCas`
      Get the view for a Sofa (subject of analysis). The view provides access to the Sofa data and the index repository that contains metadata (annotations and other feature structures) pertaining to that Sofa.
      Specified by:
        `getView` in interface `JCas`
      Parameters:
        `aSofa` - a Sofa feature structure in the CAS
      Returns:
        The view for the given Sofa
      Throws:
        `CASException` - passthru

    - #### addFsToIndexes

          public void addFsToIndexes(FeatureStructure instance)

      Description copied from interface: `JCas`
      Add a feature structure to all appropriate indexes in the repository associated with this CAS View.

      Important: after you have called `addFsToIndexes(...)` on a FS, do not change the values of any features used for indexing. If you do, the index will become corrupted and may be unusable. If you need to change an index feature value, first call `removeFsFromIndexes(...)` on the FS, change the feature values, then call `addFsToIndexes(...)` again.

      Specified by:
        `addFsToIndexes` in interface `JCas`
      Parameters:
        `instance` - The Feature Structure to be added.

    - #### removeFsFromIndexes

          public void removeFsFromIndexes(FeatureStructure instance)

      Description copied from interface: `JCas`
      Remove a feature structure from all indexes in the repository associated with this CAS View.
      Specified by:
        `removeFsFromIndexes` in interface `JCas`
      Parameters:
        `instance` - The Feature Structure to be removed.

    - #### removeAllIncludingSubtypes

          public void removeAllIncludingSubtypes(int i)

      Description copied from interface: `JCas`
      Remove all feature structures of a given type (including subtypes) from all indexes in the repository associated with this CAS View.
      Specified by:
        `removeAllIncludingSubtypes` in interface `JCas`
      Parameters:
        `i` - the CAS type constant, written as Foo.type (for a given JCas Type) or anInstanceOfFoo.getTypeIndexID(), for an instance

    - #### removeAllExcludingSubtypes

          public void removeAllExcludingSubtypes(int i)

      Description copied from interface: `JCas`
      Remove all feature structures of a given type (excluding subtypes) from all indexes in the repository associated with this CAS View.
      Specified by:
        `removeAllExcludingSubtypes` in interface `JCas`
      Parameters:
        `i` - the CAS type constant, written as Foo.type (for a given JCas Type) or anInstanceOfFoo.getTypeIndexID(), for an instance

    - #### fs2listIterator

          public <T extends FeatureStructure> ListIterator<T> fs2listIterator(FSIterator<T> it)

      Description copied from interface: `JCas`
      Wrap a standard Java `ListIterator` around an FSListIterator. Use if you feel more comfortable with java style iterators.
      Specified by:
        `fs2listIterator` in interface `JCas`
      Type Parameters:
        `T` - The particular Feature Structure type
      Parameters:
        `it` - The `FSListIterator` to be wrapped.
      Returns:
        An equivalent `ListIterator`.
      See Also:
        `CAS.fs2listIterator(FSIterator)`

    - #### createFeatureValuePath

          public FeatureValuePath createFeatureValuePath(String featureValuePath)
                                                  throws CASRuntimeException

      Description copied from interface: `JCas`
      Create a feature-value path from a string.
      Specified by:
        `createFeatureValuePath` in interface `JCas`
      Parameters:
        `featureValuePath` - String representation of the feature-value path.
      Returns:
        Feature-value path object.
      Throws:
        `CASRuntimeException` - If the input string is not well-formed.

    - #### createSofa

          public SofaFS createSofa(SofaID sofaID,
                                   String mimeType)

      Description copied from interface: `JCas`
      Create a Subject of Analysis. The new sofaFS is automatically added to the SofaIndex.
      Specified by:
        `createSofa` in interface `JCas`
      Parameters:
        `sofaID` - the SofA ID
        `mimeType` - the mime type
      Returns:
        The sofaFS.

    - #### getIndexRepository

          public FSIndexRepository getIndexRepository()

      Description copied from interface: `JCas`
      Get the index repository.
      Specified by:
        `getIndexRepository` in interface `JCas`
      Returns:
        The index repository, or `null` if none is available.

    - #### getViewName

          public String getViewName()

      Description copied from interface: `JCas`
      Get the view name. The view name is the same as the name of the view's Sofa, retrieved by getSofa().getSofaID(), except for the initial View before its Sofa has been created.
      Specified by:
        `getViewName` in interface `JCas`
      Returns:
        The name of the view

    - #### size

          public int size()

      Description copied from interface: `JCas`
      Estimate the memory consumption of this CAS instance (in bytes).
      Specified by:
        `size` in interface `JCas`
      Returns:
        The estimated memory used by this CAS instance.

    - #### getAnnotationIndex

          public AnnotationIndex<Annotation> getAnnotationIndex()

      Description copied from interface: `JCas`
      Get the standard annotation index.
      Specified by:
        `getAnnotationIndex` in interface `JCas`
      Returns:
        The standard annotation index.

    - #### getAnnotationIndex

          public <T extends Annotation> AnnotationIndex<T> getAnnotationIndex(Type type)
                                                                       throws CASRuntimeException

      Description copied from interface: `JCas`
      Get the standard annotation index restricted to a specific annotation type.
      Specified by:
        `getAnnotationIndex` in interface `JCas`
      Type Parameters:
        `T` - the Java class corresponding to type
      Parameters:
        `type` - The annotation type the index is restricted to.
      Returns:
        The standard annotation index, restricted to `type`.
      Throws:
        `CASRuntimeException`

    - #### getAnnotationIndex

          public <T extends Annotation> AnnotationIndex<T> getAnnotationIndex(int type)
                                                                       throws CASRuntimeException

      Description copied from interface: `JCas`
      Get the standard annotation index restricted to a specific annotation type.
      Specified by:
        `getAnnotationIndex` in interface `JCas`
      Type Parameters:
        `T` - the Java class corresponding to type
      Parameters:
        `type` - The annotation type the index is restricted to, passed as an integer using the form MyAnnotationType.type
      Returns:
        The standard annotation index, restricted to `type`.
      Throws:
        `CASRuntimeException` - -

    - #### getAnnotationIndex

          public <T extends Annotation> AnnotationIndex<T> getAnnotationIndex(Class<T> clazz)

      Description copied from interface: `JCas`
      Get the standard annotation index restricted to a specific annotation type.
      Specified by:
        `getAnnotationIndex` in interface `JCas`
      Type Parameters:
        `T` - the Java class clazz
      Parameters:
        `clazz` - The JCas cover class for the annotation type the index is restricted to,
      Returns:
        The standard annotation index, restricted to `type`.

    - #### getViewIterator

          public Iterator<JCas> getViewIterator()
                                         throws CASException

      Description copied from interface: `JCas`
      Get iterator over all views in this JCas. Each view provides access to Sofa data and the index repository that contains metadata (annotations and other feature structures) pertaining to that Sofa.
      Specified by:
        `getViewIterator` in interface `JCas`
      Returns:
        an iterator which returns all views. Each object returned by the iterator is of type JCas.
      Throws:
        `CASException` - -

    - #### getViewIterator

          public Iterator<JCas> getViewIterator(String localViewNamePrefix)
                                         throws CASException

      Description copied from interface: `JCas`
      Get iterator over all views with the given name prefix. Each view provides access to Sofa data and the index repository that contains metadata (annotations and other feature structures) pertaining to that Sofa.

      When passed the prefix namePrefix, the iterator will return all views who name is either exactly equal to namePrefix or is of the form namePrefix`.`suffix, where suffix can be any String.

      Specified by:
        `getViewIterator` in interface `JCas`
      Parameters:
        `localViewNamePrefix` - the local name prefix, before any sofa name mapping is done, for this view (note: this is the same as the associated Sofa name prefix).
      Returns:
        an iterator which returns all views with the given name prefix. Each object returned by the iterator is of type JCas.
      Throws:
        `CASException` - -

    - #### protectIndexes

          public AutoCloseable protectIndexes()

      Description copied from interface: `JCas`
      Call this method to set up a region, ended by a close() call on the returned object, You can use this or the `JCas.protectIndexes(Runnable)` method to protected the indexes.

      This approach allows arbitrary code between the protectIndexes and the associated close method.

      The close method is best done in a finally block, or using the try-with-resources statement in Java 8.

      Specified by:
        `protectIndexes` in interface `JCas`
      Returns:
        an object used to record things that need adding back

    - #### protectIndexes

          public void protectIndexes(Runnable runnable)

      Description copied from interface: `JCas`
      Runs the code in the runnable inside a protection block, where any modifications to features done while in this block will be done in a way to protect any indexes which otherwise might become corrupted by the update action; the protection is achieved by temporarily removing the FS (if it is in the indexes), before the update happens. At the end of the block, affected indexes have any removed-under-the-covers FSs added back.
      Specified by:
        `protectIndexes` in interface `JCas`
      Parameters:
        `runnable` - code to execute while protecting the indexes.

    - #### getCasType

          public Type getCasType(Class<? extends FeatureStructure> clazz)

      Return the UIMA Type object corresponding to this JCas's JCas cover class (Note: different JCas's, with different type systems, may share the same cover class impl)
      Specified by:
        `getCasType` in interface `JCas`
      Parameters:
        `clazz` - a JCas cover class
      Returns:
        the corresponding UIMA Type object

    - #### getAllIndexedFS

          public <T extends TOP> FSIterator<T> getAllIndexedFS(Class<T> clazz)

      Description copied from interface: `JCas`
      Gets an iterator over all indexed FeatureStructures of the specified Type (and any of its subtypes). The elements are returned in arbitrary order, and duplicates (if they exist) are not removed.
      Specified by:
        `getAllIndexedFS` in interface `JCas`
      Type Parameters:
        `T` - the Java clazz
      Parameters:
        `clazz` - - the JCas Java class specifing which type and subtypes are included
      Returns:
        An iterator that returns all indexed FeatureStructures of the JCas clazz and its subtypes, in no particular order.

    - #### getIndex

          public <T extends TOP> FSIndex<T> getIndex(String label,
                                                     Class<T> clazz)

      Description copied from interface: `JCas`
      Retrieve an index according to a label and a type specified using a JCas class. The type is used to narrow down the index of a more general type to a more specific one. Generics: T is the associated Java cover class for the type.
      Specified by:
        `getIndex` in interface `JCas`
      Type Parameters:
        `T` - the Java clazz
      Parameters:
        `label` - The name of the index.
        `clazz` - The JCas class (mostly likely written as MyJCasClass.class), which must correspond to a subtype of the type of the index.
      Returns:
        The specified, or `null` if an index with that name doesn't exist.

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